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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17161320_17161950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17161320 - 17161950

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GGAACCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCTTTGGAACC

Flanking Amino Acid:

FSSAEPTANLEEGTVSVSSQ

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

81.3

33.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.27

55.5

40.9

Minor 5ss

42.8

-0.8

3.4

61.3

44.6

Minor BPS

46.4

-0.2

2.1

58.9

40.5

Associated Gene:

Gene:

ALG13

Ensembl Gene ID:

ENSAPLG00000009945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027705

17151658 - 17176155

24498

ENSAPLT00000010363

17151658 - 17176155

24498