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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17162007_17164680_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17162007 - 17164680

Intron Length:

2674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTAAAGCT

5'SS Class:

weak_major

3'SS Sequence:

CTGTGCATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

CTTCAGTTAATC

Flanking Amino Acid:

ALPVSYEQCIYPDCGTAAVF

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.19

1.2

36.9

Major BPS

85.7

0.89

0.8

22.2

Major PPT

72.6

0.51

62.5

43.1

Minor 5ss

31.2

-2.1

3.4

45.8

42.3

Minor BPS

48.8

-0.1

2.2

64.53

41.3

Associated Gene:

Gene:

ALG13

Ensembl Gene ID:

ENSAPLG00000009945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039677

17151658 - 17165997

14340