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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17162175_17162596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17162175 - 17162596

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTTTCCTAAATC

Flanking Amino Acid:

EEDVEEICENGKFHEDFLYA

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

72.7

0.57

72.1

31.1

Major PPT

80.8

0.69

0.7

73.3

31.7

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

77.5

0.84

1.6

86.11

32.2

Associated Gene:

Gene:

ALG13

Ensembl Gene ID:

ENSAPLG00000009945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027705

17151658 - 17176155

24498

ENSAPLT00000010363

17151658 - 17176155

24498