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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17162733_17164702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17162733 - 17164702

Intron Length:

1970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

CTTCTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

CTACTTGTAAAT

Flanking Amino Acid:

GDESAFPALPSQGSPTPIVH

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.1

32.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

85.8

0.8

0.6

84.7

Minor 5ss

44.1

-0.6

2.9

63.8

41.6

Minor BPS

45.6

-0.2

62.63

41.6

Associated Gene:

Gene:

ALG13

Ensembl Gene ID:

ENSAPLG00000009945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027705

17151658 - 17176155

24498

ENSAPLT00000010363

17151658 - 17176155

24498