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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17165186_17165347_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17165186 - 17165347

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTAAACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TACCCTTTAAAC

Flanking Amino Acid:

QRHNRGFGMPRGSGRFINRH

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

38.4

Major BPS

0.7

0.9

79.6

29.1

Major PPT

65.3

0.35

0.9

63.6

36.1

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

62.7

0.38

1.4

66.35

38.8

Associated Gene:

Gene:

ALG13

Ensembl Gene ID:

ENSAPLG00000009945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010363

17151658 - 17176155

24498

ENSAPLT00000039677

17151658 - 17165997

14340