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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17169959_17170842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17169959 - 17170842

Intron Length:

884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TTAAATTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTAAAT

Flanking Amino Acid:

EKVPRNPSEKRGDNWEGNDA

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

63.8

0.31

62.3

43.7

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

70.8

0.73

1.3

85.51

34.3

Associated Gene:

Gene:

ALG13

Ensembl Gene ID:

ENSAPLG00000009945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027705

17151658 - 17176155

24498

ENSAPLT00000010363

17151658 - 17176155

24498