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Intron Name: Anas_platyrhynchos_platyrhynchos_10_172421_172969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

172421 - 172969

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTGCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATTT

Flanking Amino Acid:

VNQNLAIDGFGACEGTLACS

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.9

36.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

67.2

0.39

59.4

41.1

Minor 5ss

37.4

-1.4

3.6

54.1

45.6

Minor BPS

0.52

1.7

84.31

36.7

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034776

164545 - 173502

8958

ENSAPLT00000018593

167345 - 175518

8174

ENSAPLT00000005100

167192 - 173502

6311