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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1727446_1727840_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1727446 - 1727840

Intron Length:

395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

ATLKSMNLEKISALMDKFEH

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

CHMP1B

Ensembl Gene ID:

ENSAPLG00000010677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011143

1724067 - 1731263

7197