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Intron Name: Anas_platyrhynchos_platyrhynchos_10_173100_173346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

173100 - 173346

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CCTCACTTAATT

Flanking Amino Acid:

MLDLAYGLTETSRLGCQVRI

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.3

76.2

39.9

Major BPS

78.2

0.7

77.9

32.1

Major PPT

92.7

0.96

0.6

92.4

17.8

Minor 5ss

45.3

-0.5

2.8

60.4

37.5

Minor BPS

63.2

0.49

1.6

74.17

42.9

Associated Gene:

Gene:

MSN

Ensembl Gene ID:

ENSAPLG00000004209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005100

167192 - 173502

6311

ENSAPLT00000034776

164545 - 173502

8958

ENSAPLT00000018593

167345 - 175518

8174