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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17340363_17367160_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17340363 - 17367160

Intron Length:

26798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGGC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTGCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

TTTGCAGTAACC

Flanking Amino Acid:

PKKVEWKRPKDLCEDPHLFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.2

39.3

Major BPS

54.4

0.11

1.2

36.4

Major PPT

0.7

0.9

77.4

36.9

Minor 5ss

28.9

-2.4

3.6

41.1

45.6

Minor BPS

53.1

0.08

2.3

75.46

41.2

Associated Gene:

Gene:

CAPN6

Ensembl Gene ID:

ENSAPLG00000010358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030802

17331494 - 17389000

57507

ENSAPLT00000010805

17337927 - 17389744

51818