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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17374795_17376024_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17374795 - 17376024

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTGGAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

AAAACATGATTT

Flanking Amino Acid:

GLTIENDGEFWMTFEDWCKN

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

54.4

0.11

61.4

34.3

Major PPT

57.3

0.17

1.1

53.5

40.4

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

42.7

-0.4

1.8

56.08

39.3

Associated Gene:

Gene:

CAPN6

Ensembl Gene ID:

ENSAPLG00000010358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036729

17357741 - 17389000

31260

ENSAPLT00000030802

17331494 - 17389000

57507

ENSAPLT00000010805

17337927 - 17389744

51818