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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17376218_17378756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17376218 - 17378756

Intron Length:

2539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGTC

5'SS Class:

major

3'SS Sequence:

TCTCCGGTACTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

AAGGAATTAACA

Flanking Amino Acid:

DNKTFLQNPQYIFDVKKTED

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

69.4

35.7

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

62.1

0.27

54.7

40.2

Minor 5ss

28.2

-2.5

3.6

40.3

46.1

Minor BPS

-0.1

1.9

57.43

41.3

Associated Gene:

Gene:

CAPN6

Ensembl Gene ID:

ENSAPLG00000010358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036729

17357741 - 17389000

31260

ENSAPLT00000030802

17331494 - 17389000

57507

ENSAPLT00000010805

17337927 - 17389744

51818