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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17378880_17380546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17378880 - 17380546

Intron Length:

1667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TCTGTGGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATCAAT

U12 Branch Point Sequence:

AATCCCTTTACT

Flanking Amino Acid:

NIIIGFEIFKVEDNRSYRIH

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

60.3

0.26

1.2

68.8

34.5

Major PPT

68.3

0.41

61.9

39.9

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

68.6

0.67

1.6

81.53

39.4

Associated Gene:

Gene:

CAPN6

Ensembl Gene ID:

ENSAPLG00000010358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036729

17357741 - 17389000

31260

ENSAPLT00000030802

17331494 - 17389000

57507

ENSAPLT00000010805

17337927 - 17389744

51818