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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17388668_17389301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17388668 - 17389301

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTTAT

U12 Branch Point Sequence:

AGTGCTTCAGCT

Flanking Amino Acid:

KNIDSPVIVQVWNSNVLCDQ

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

49.3

-0

1.5

43.1

49.2

Major PPT

73.1

0.52

0.8

64.9

36.4

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

48.5

-0

1.9

67.39

43.4

Associated Gene:

Gene:

CAPN6

Ensembl Gene ID:

ENSAPLG00000010358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010805

17337927 - 17389744

51818