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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17532394_17535387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17532394 - 17535387

Intron Length:

2994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ATCGTATTATTT

Flanking Amino Acid:

VYCVNCLCSENGNVLCSRIR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.7

40.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

83.4

0.75

0.8

77.6

31.2

Minor 5ss

34.1

-1.8

3.5

47.2

48.2

Minor BPS

46.1

-0.2

1.9

62.39

42.4

Associated Gene:

Gene:

CHRDL1

Ensembl Gene ID:

ENSAPLG00000011574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030083

17531542 - 17568472

36931

ENSAPLT00000012124

17530633 - 17568862

38230