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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17535482_17554283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17535482 - 17554283

Intron Length:

18802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTAT

5'SS Class:

strong_major

3'SS Sequence:

CCATTGCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TCTGCATGAAGT

Flanking Amino Acid:

VPQLCCPRCPEDSLFSVSSK

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

85.9

25.1

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

74.8

0.56

0.9

65.1

Minor 5ss

41.9

-0.9

2.9

58.4

46.2

Minor BPS

47.8

-0

2.1

69.74

46.7

Associated Gene:

Gene:

CHRDL1

Ensembl Gene ID:

ENSAPLG00000011574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030083

17531542 - 17568472

36931

ENSAPLT00000012124

17530633 - 17568862

38230