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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17554430_17555407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17554430 - 17555407

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TGTTTACCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCCTTCTAAATG

Flanking Amino Acid:

ANQCAQCSCSEGNVYCGLKT

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

71.3

0.48

67.1

39.4

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

54.8

0.01

1.8

57.74

Associated Gene:

Gene:

CHRDL1

Ensembl Gene ID:

ENSAPLG00000011574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012124

17530633 - 17568862

38230

ENSAPLT00000030083

17531542 - 17568472

36931