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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17555502_17558979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17555502 - 17558979

Intron Length:

3478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCGTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

ACTCCCCTGACT

Flanking Amino Acid:

VPESCCPVCRGDGELSWEHA

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

70.2

0.46

44.6

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

60.1

0.4

1.7

76.2

40.1

Associated Gene:

Gene:

CHRDL1

Ensembl Gene ID:

ENSAPLG00000011574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030083

17531542 - 17568472

36931

ENSAPLT00000012124

17530633 - 17568862

38230