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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17559048_17560335_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17559048 - 17560335

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TGTCTCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

TGTCTCCCAACA

Flanking Amino Acid:

IFRQPANREARHSYHRSHYD

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.5

41.3

Major BPS

66.4

0.41

37.6

Major PPT

72.1

0.5

0.9

66.8

34.3

Minor 5ss

39.2

-1.2

3.4

59.1

45.3

Minor BPS

49.6

-0

1.9

66.85

38.8

Associated Gene:

Gene:

CHRDL1

Ensembl Gene ID:

ENSAPLG00000011574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030083

17531542 - 17568472

36931

ENSAPLT00000012124

17530633 - 17568862

38230