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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17565884_17567024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17565884 - 17567024

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CTTCCAGTAACA

Flanking Amino Acid:

IEIHVWTIRKGILRHFYIEK

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

54.4

0.11

1.2

36.4

Major PPT

73.6

0.53

1.1

75.3

33.5

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

49.9

-0

2.3

70.02

Associated Gene:

Gene:

CHRDL1

Ensembl Gene ID:

ENSAPLG00000011574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030083

17531542 - 17568472

36931

ENSAPLT00000012124

17530633 - 17568862

38230