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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17958254_17959539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17958254 - 17959539

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTT

5'SS Class:

major

3'SS Sequence:

CTTGTGTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CTTGTGTGAATA

Flanking Amino Acid:

KGERGLPGQPGSRGIQGPPG

Intron Amino Acid Position:

1280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.5

39.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

61.8

0.27

1.1

57.9

42.1

Minor 5ss

41.7

-0.9

3.6

64.7

46.6

Minor BPS

45.4

-0.3

2.2

58.85

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027572

17954757 - 18000691

45935

ENSAPLT00000020770

17954757 - 18042249

87493

ENSAPLT00000013437

17954757 - 18000691

45935