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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17961247_17962568_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17961247 - 17962568

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGACTC

5'SS Class:

major

3'SS Sequence:

CCACAATGTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TGTTCCACAATG

Flanking Amino Acid:

PGRPGPSGPPGSPGPEGPRG

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

39.3

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

50.6

0.01

1.1

52.4

40.5

Minor 5ss

32.9

-2

3.1

42.9

44.1

Minor BPS

54.9

0.02

1.9

65.83

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027572

17954757 - 18000691

45935

ENSAPLT00000020770

17954757 - 18042249

87493