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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17986074_18017617_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

17986074 - 18017617

Intron Length:

31544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAAAGG

5'SS Class:

major

3'SS Sequence:

CCTGGACCAAAAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

TTTTCCTGGACC

Flanking Amino Acid:

LSKCDCSGVKGEKGLPGLTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

64.9

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

-0

1.1

45.9

34.7

Minor 5ss

26.8

-2.7

2.8

31.3

42.4

Minor BPS

78.3

0.87

1.3

87.06

29.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020770

17954757 - 18042249

87493