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Intron Name: Anas_platyrhynchos_platyrhynchos_10_179898_180466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179898 - 180466

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATAAAT

U12 Branch Point Sequence:

AGCAGATAAATT

Flanking Amino Acid:

KESKNSEESLGIGLAQNDDS

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

56.8

0.17

1.2

65.3

38.6

Major PPT

72.5

0.51

0.8

65.6

36.1

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

39.9

-0.6

2.1

52.71

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024377

178177 - 195376

17200

ENSAPLT00000022126

178177 - 195376

17200