Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_17991154_17991634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17991154 - 17991634

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

GAAACATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TTCACATGAACA

Flanking Amino Acid:

DTGPPGPPGSVISRPGIDAT

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

68.8

37.1

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

63.9

0.31

1.1

54.4

44.4

Minor 5ss

43.5

-0.7

2.7

42.2

Minor BPS

56.7

0.21

1.8

70.67

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013437

17954757 - 18000691

45935

ENSAPLT00000027572

17954757 - 18000691

45935