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Intron Name: Anas_platyrhynchos_platyrhynchos_10_17996669_17996774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17996669 - 17996774

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCACATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCAAA

U12 Branch Point Sequence:

TCTTCTTGCACA

Flanking Amino Acid:

LNFQGPKGEKGEQGLQGPPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.6

40.2

Major BPS

47.9

-0.1

1.3

54.7

Major PPT

66.1

0.36

0.9

64.7

36.4

Minor 5ss

31.4

-2.1

2.7

33.7

35.3

Minor BPS

56.8

0.21

1.9

71.68

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027572

17954757 - 18000691

45935

ENSAPLT00000013437

17954757 - 18000691

45935