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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1806156_1806531_R


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1806156 - 1806531

Intron Length:
376

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
TTATTTTTAAAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTATTTTTAAAA

Flanking Amino Acid:
PDSSFQCYSVHWDNNERERM

Intron Amino Acid Position:
923

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.6
0.67
1
78.5
35.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
72.3
0.5
1.1
75.8
37

Minor 5ss
40.6
-1.1
2.8
58.6
39.3

Minor BPS
71.1
0.66
1.3
76.99
33.4

Associated Gene:

Gene:
BRWD3

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1796175 - 1833250
37076

1796175 - 1835355
39181

1796175 - 1835355
39181