Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_1807622_1808467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1807622 - 1808467

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCGATACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTGTCGATACAT

Flanking Amino Acid:

KQPWNKMELREQEFVKTVGI

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

76.3

30.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

60.9

0.25

54.6

39.7

Minor 5ss

33.6

-1.9

2.8

31.7

42.6

Minor BPS

43.8

-0.3

2.5

69.95

46.5

Associated Gene:

Gene:

BRWD3

Ensembl Gene ID:

ENSAPLG00000009512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034186

1796175 - 1833250

37076

ENSAPLT00000010014

1796175 - 1835355

39181