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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18141604_18142460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18141604 - 18142460

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTATGTTAATA

Flanking Amino Acid:

LGFQGEKGEKGDVGLPGPPG

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.1

0.81

0.8

79.9

32.2

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

52.7

0.08

2.1

66.99

40.2

Associated Gene:

Gene:

COL4A6

Ensembl Gene ID:

ENSAPLG00000013356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014088

18042267 - 18177486

135220