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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18143642_18145024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18143642 - 18145024

Intron Length:

1383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTAATGTTGATG

Flanking Amino Acid:

PGEKGLPGLPGFGGVGEKGE

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.1

35.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

85.9

0.81

0.7

84.9

29.9

Minor 5ss

31.2

-2.1

3.3

40.6

45.1

Minor BPS

46.4

-0.4

2.1

54.99

40.7

Associated Gene:

Gene:

COL4A6

Ensembl Gene ID:

ENSAPLG00000013356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014088

18042267 - 18177486

135220