Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_18167747_18168191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18167747 - 18168191

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

CTTTCTTTAACT

Flanking Amino Acid:

PGTKGSPGTPGLSEVGLKGP

Intron Amino Acid Position:

1193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

74.6

0.61

1.4

34.5

Major PPT

70.6

0.46

71.6

38.1

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

87.7

1.26

0.9

95.57

31.2

Associated Gene:

Gene:

COL4A6

Ensembl Gene ID:

ENSAPLG00000013356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014088

18042267 - 18177486

135220