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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18168794_18169523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18168794 - 18169523

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

AATGTGCTAATT

Flanking Amino Acid:

AGHPGLDGSSGLPGPPGPRG

Intron Amino Acid Position:

1274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

74.8

0.56

0.9

66.7

40.6

Minor 5ss

37.7

-1.4

3.1

48.6

47.2

Minor BPS

43.9

-0.3

2.3

63.46

41.3

Associated Gene:

Gene:

COL4A6

Ensembl Gene ID:

ENSAPLG00000013356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014088

18042267 - 18177486

135220