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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18176159_18176383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18176159 - 18176383

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CCAATTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAT

U12 Branch Point Sequence:

GCTGCTCCAATT

Flanking Amino Acid:

GQEKSHNQDLGFAGSCLPRF

Intron Amino Acid Position:

1513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.4

Major BPS

59.5

0.24

1.3

68.4

35.9

Major PPT

74.7

0.56

0.9

65.2

40.8

Minor 5ss

34.3

-1.8

2.8

37.6

42.2

Minor BPS

45.4

-0.2

1.9

61.15

43.2

Associated Gene:

Gene:

COL4A6

Ensembl Gene ID:

ENSAPLG00000013356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014088

18042267 - 18177486

135220