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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18212633_18213941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18212633 - 18213941

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAGAT

U12 Branch Point Sequence:

TTTGTTTTAACA

Flanking Amino Acid:

AAILGGFKDMTPSIPTLNCT

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

65.2

41.6

Major BPS

0.35

1.3

60.7

45.9

Major PPT

84.2

0.77

0.9

35.4

Minor 5ss

37.5

-1.4

44.3

45.4

Minor BPS

75.7

0.8

1.2

82.25

33.1

Associated Gene:

Gene:

LAMP2

Ensembl Gene ID:

ENSAPLG00000009185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028621

18208609 - 18232469

23861

ENSAPLT00000009267

18208929 - 18220060

11132