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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18221478_18223708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18221478 - 18223708

Intron Length:

2231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATAAAT

Flanking Amino Acid:

IKLDRKQKANGFFFYSSERK

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

62.5

0.47

1.7

83.82

36.1

Associated Gene:

Gene:

LAMP2

Ensembl Gene ID:

ENSAPLG00000009185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046429

18220261 - 18266579

46319