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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18259530_18266509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18259530 - 18266509

Intron Length:

6980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

TCCTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TCTGTCTTACTA

Flanking Amino Acid:

LPLLLLLGASGFLQSYAVEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

58.3

46.6

Major BPS

0.75

78.6

Major PPT

84.8

0.78

0.8

79.1

32.6

Minor 5ss

36.2

-1.6

3.4

47.3

48.1

Minor BPS

55.9

0.18

1.7

65.77

41.9

Associated Gene:

Gene:

LAMP2

Ensembl Gene ID:

ENSAPLG00000009185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009572

18249336 - 18266579

17244

ENSAPLT00000046429

18220261 - 18266579

46319

ENSAPLT00000042489

18252391 - 18266579

14189