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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18504098_18504707_F

Intron Information:

Intron Rank:

127971

Intron Class:

major

Intron Phase:

Intron Coordinates:

18504098 - 18504707

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

TGTTGCTGAGGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

0.83

0.7

81.2

36.5

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

45.5

-0.2

2.3

69.66

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038413

18498584 - 18506426

7843