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Intron Name: Anas_platyrhynchos_platyrhynchos_10_18556210_18572951_F

Intron Information:

Intron Rank:

138462

Intron Class:

major

Intron Phase:

Intron Coordinates:

18556210 - 18572951

Intron Length:

16742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACAGTTTGTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.8

0.74

0.7

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

43.3

-0.4

1.7

54.82

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033003

18546733 - 18573207

26475