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Intron Name: Anas_platyrhynchos_platyrhynchos_10_19036960_19037475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19036960 - 19037475

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATT

Flanking Amino Acid:

WHSDRVIYEKECGNYPGFLT

Intron Amino Acid Position:

1049

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.7

0.42

1.1

61.9

44.4

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

74.6

0.85

82.48

32.6

Associated Gene:

Gene:

THOC2

Ensembl Gene ID:

ENSAPLG00000010614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011119

19027264 - 19072972

45709

ENSAPLT00000031675

19027264 - 19078397

51134

ENSAPLT00000019755

19027264 - 19078397

51134