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Intron Name: Anas_platyrhynchos_platyrhynchos_10_19044751_19046570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19044751 - 19046570

Intron Length:

1820

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATCC

Flanking Amino Acid:

YVANQLKAGKSFDLLILKEV

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.7

91.8

25.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.8

80.4

31.5

Minor 5ss

29.8

-2.3

4.1

49.5

46.7

Minor BPS

64.6

0.44

1.6

73.19

38.5

Associated Gene:

Gene:

THOC2

Ensembl Gene ID:

ENSAPLG00000010614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031675

19027264 - 19078397

51134

ENSAPLT00000019755

19027264 - 19078397

51134

ENSAPLT00000011119

19027264 - 19072972

45709