Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_19110868_19112355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19110868 - 19112355

Intron Length:

1488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTATCCTCATGT

Flanking Amino Acid:

QLAEAGFYSIGNGDHVVCFH

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

67.9

0.4

1.1

38.2

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

0.17

2.1

77.25

44.9

Associated Gene:

Gene:

XIAP

Ensembl Gene ID:

ENSAPLG00000011039

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047673

19104700 - 19118084

13385

ENSAPLT00000023052

19104700 - 19118996

14297

ENSAPLT00000011501

19105960 - 19118084

12125