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Intron Name: Anas_platyrhynchos_platyrhynchos_10_19173494_19174809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19173494 - 19174809

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGAATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTAATCTGAATT

Flanking Amino Acid:

NFFIQCSGCKGVVTAEMFRH

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.1

0.38

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

56.9

0.29

1.5

70.05

Associated Gene:

Gene:

STAG2

Ensembl Gene ID:

ENSAPLG00000011118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026959

19168230 - 19206813

38584

ENSAPLT00000011721

19168230 - 19206813

38584