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Intron Name: Anas_platyrhynchos_platyrhynchos_10_19176612_19179317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19176612 - 19179317

Intron Length:

2706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TAATCCTTACTA

Flanking Amino Acid:

RAFRHTSTLAAMKLMTALVN

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.1

0.63

0.9

73.1

36.9

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

67.7

0.55

1.6

73.48

38.3

Associated Gene:

Gene:

STAG2

Ensembl Gene ID:

ENSAPLG00000011118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011721

19168230 - 19206813

38584

ENSAPLT00000026959

19168230 - 19206813

38584