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Intron Name: Anas_platyrhynchos_platyrhynchos_10_19259291_19261934_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19259291 - 19261934

Intron Length:

2644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAGGGAGA

5'SS Class:

weak_major

3'SS Sequence:

CTACATAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTTATTTTAAAA

Flanking Amino Acid:

NVACPPGTHGVPEDVIFCLK

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.2

53.5

45.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

57.6

0.17

1.1

51.9

40.2

Minor 5ss

32.2

-2

3.4

39.3

46.3

Minor BPS

62.3

0.38

1.4

69.78

Associated Gene:

Gene:

SH2D1A

Ensembl Gene ID:

ENSAPLG00000012436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012945

19245454 - 19261992

16539