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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1961962_1968657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1961962 - 1968657

Intron Length:

6696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTGGTTGTAATC

Flanking Amino Acid:

KVGGGFLLASGGLFLLLIFL

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

40.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.86

0.7

80.3

31.7

Minor 5ss

-0.4

2.8

57.8

46.4

Minor BPS

44.8

-0.4

52.11

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027660

1956588 - 1969235

12648

ENSAPLT00000008992

1956588 - 1969974

13387