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Intron Name: Anas_platyrhynchos_platyrhynchos_10_2049200_2050580_R

Intron Information:

Intron Rank:

131202

Intron Class:

major

Intron Phase:

Intron Coordinates:

2049200 - 2050580

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAG

U12 Branch Point Sequence:

TTTTTCTTCTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.2

35.1

Major BPS

57.4

0.18

1.6

57.4

49.1

Major PPT

88.3

0.86

0.7

81.1

Minor 5ss

33.8

-1.8

3.2

40.4

Minor BPS

47.7

-0

3.6

87.15

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042287

2048761 - 2089069

40309