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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20533927_20535410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20533927 - 20535410

Intron Length:

1484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTGCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

GCTTCCTGATCT

Flanking Amino Acid:

TEEKEKLLTQGFTNWNKRDF

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

76.2

0.59

68.8

42.1

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

61.6

0.44

1.8

77.81

44.1

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024184

20526581 - 20555327

28747

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747