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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20535534_20535922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20535534 - 20535922

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGATCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTTGCTTACTG

Flanking Amino Acid:

LYYRKTIGYKVPRNPDLPNA

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

81.4

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

68.2

0.41

0.9

65.6

34.7

Minor 5ss

42.7

-0.8

3.4

64.6

46.7

Minor BPS

58.4

0.13

2.1

70.75

43.1

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747