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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20536037_20536238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20536037 - 20536238

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATTATGTTAATA

Flanking Amino Acid:

LRVSEPKVPKAPRPPKQPNI

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

84.4

0.85

34.5

Major PPT

71.4

0.48

1.1

38.1

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

55.2

0.16

69.83

36.7

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747