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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20537681_20538289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20537681 - 20538289

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAGAG

5'SS Class:

major

3'SS Sequence:

TCTCTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TGTCTCTTATTT

Flanking Amino Acid:

TTILERGEKKTAEMNERLQK

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

67.2

38.3

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

86.9

0.83

0.7

28.1

Minor 5ss

26.1

-2.7

29.7

43.2

Minor BPS

62.3

0.46

1.6

77.8

38.7

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024184

20526581 - 20555327

28747

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747